dtd1 D-aminoacyl-tRNA deacylase 1 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: dtd1provided by ZNC
Official Full Name: D-aminoacyl-tRNA deacylase 1provided by ZNC
Primary source: ZFIN:ZDB-GENE-040801-175
See related: Ensembl:ENSDARG00000044628 AllianceGenome:ZFIN:ZDB-GENE-040801-175
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: dtd; hars2; zgc:92657
Summary: Enables Gly-tRNA(Ala) hydrolase activity. Predicted to be involved in tRNA metabolic process. Predicted to be active in cytoplasm. Orthologous to human DTD1 (D-aminoacyl-tRNA deacylase 1). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 6

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
106	current	GRCz11 (GCF_000002035.6)	6	NC_007117.7 (6802556..6808505)
105	previous assembly	GRCz10 (GCF_000002035.5)	6	NC_007117.6 (6645387..6651336)

Chromosome 6 - NC_007117.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables D-aminoacyl-tRNA deacylase activity	IEA Inferred from Electronic Annotation more info
enables D-tyrosyl-tRNA(Tyr) deacylase activity	IBA Inferred from Biological aspect of Ancestor more info
enables Gly-tRNA(Ala) hydrolase activity	IDA Inferred from Direct Assay more info	PubMed
enables RNA binding	IEA Inferred from Electronic Annotation more info
enables aminoacyl-tRNA editing activity	IEA Inferred from Electronic Annotation more info
enables hydrolase activity	IEA Inferred from Electronic Annotation more info
enables tRNA binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in tRNA metabolic process	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in cytoplasm	IBA Inferred from Biological aspect of Ancestor more info
located_in cytoplasm	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: D-aminoacyl-tRNA deacylase 1

Names: D-tyrosyl-tRNA deacylase 1; D-tyrosyl-tRNA(Tyr) deacylase 1; gly-tRNA(Ala) deacylase 1; gly-tRNA(Gly) deacylase 1; histidyl-tRNA synthetase 2, mitochondrial (putative)

NP_001003440.1

EC 3.1.1.96

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.